Sequence Details

BLAST PRIMER
Symbol
hsa_DNAJC6_0001300
Sequence Length
369 nt
GC Content
0.4309
CAUAAGCAAAAUUAUAACCCCGCACACCGACUUGCAUGCAAUUAUCAUAGCCCGAGUGCUCCUCCGUUGAGAGACUUCGCCCCCGAGACCGCUGACUGUGAAUGACAAAUCAAAAGUCAGGGUUGCAGAAUCAGCCGGACUUUCCUGCUCAUUUGCAGCAGAGGGAGGAAGCAGAGAAUGAAAGAUUCUGAAAAUAAAGCUAGGAUCUCUCUUAUAAUGUUGAAUAGAAGCAGUGAUGUUUAAAAACAGACACUUUUAUUUCCUGCAAACCUGGAGAUACUUGUUUCAUCACCUAAGAAUCAUUUGACUGCAUAUGCUGAGAAAAAGGGAAAUUCGUGCCUGUGAAAUCUAACAAGAGCCCAGCACAAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-76.60 kcal/mol
Ensemble Metrics
Free Energy: -84.92
Frequency: 0.0000
Diversity: 124.41
Structure Visualization
Structure Prediction
MFE Structure Prediction
(....)(...........(((((((..((....(((((.......))).)).)).))))(((((((((....)))((((....))))..(.(((.((((((((((((.....((((((..(((((......))))).))))))..)).))))))))))))).))))))).((((.((((((.((((((((..........)))))))).(((((...((.((((.(.(((.((((.((((....))))..))))..(((((((.........)))))))))).))))).))..))))).))))))..))))...............)))......((((.((.(...(((....)))..)))))))..)
Thermodynamic Ensemble Prediction
((({.{(,.............({{,...,.{{{(,,,({......,,,.)}.}}}))||((((((,((....},}{(({....})}}.{(.((({((,(((,{,,....}}}.,||||}}|||(({{,,.,,|||,{||}}}),},)}),}))))))))}),,)))))}.|{((.((((((.((((((((..........)))))))).{{{{{...{(,((({,,{({{,{(((.((({....}}))..)})}..(((((((.........))))))),,})))))}}))..}}})}.))))))..)))).,,}}{{........|||....},{{{{,((,{...(((....)))..,)})))).,)
Back