Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_DNAJC6_0006100

Sequence Length

250 nt

GC Content

0.3000

GAGUGGUUAUUAUUGAGUCGAGAAUUUUUGGGAAAAGUAACACGUGGAGAGUCAAUUUUUGAGUGGAAGGAGUCUGAAGAGAGGGUAGGAACCAACCUCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUUUGUGGCUUUAUCUUCUAUGUGCCAUUCUAUUAAUAUUUCUAUUCUACAGAUAAGGAAAUCAAGACUUCUCUAGACUAUAUAUCCAGCUAAUAGCAGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-30.00 kcal/mol

Ensemble Metrics

Free Energy: -35.25

Frequency: 0.0002

Diversity: 86.15

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((((.(((((((((.(((((((..(((((...(...((((((((((((((..((((.((..........)).))))((((...........)))).......................................................)))))).....)))))))).).)))))..))).)))).))))....)))))...))))...))))((((.(.((((...........)))))))))

Thermodynamic Ensemble Prediction

((((((((.{({({,((({(((({,{,|{{{{,...|,..((({(((((({{{,.||||||,|||,.,,,|,|||,|,||{{((,.,,,......)))),.....................................................,||||},.....}}}}}},)}}})}}},..,,..|||}|,}}}....))},},,,}})),.,))))|||{.|,||||...,,,.,,|.,})))}}})