Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_DNAJC6_0011000

Sequence Length

195 nt

GC Content

0.4359

AUACCUGGGCUAUAUGUGUGACCUACUGGCAGACAAGCCCUACCGCCCUCACUUCAAGCCUCUCACAAUUAAGUCGAUCACUGUCAGUCCAAUACCCUUUUUCAACAAACAGAGGAAUGGAUGUCGCCCUUACUGUGAUGUACUCAUUGGAGAAACCAAAAUAUAUUCGACUUGCACAGAUUUUGAACGAAUGAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-34.50 kcal/mol

Ensemble Metrics

Free Energy: -37.37

Frequency: 0.0094

Diversity: 33.54

Structure Visualization

Structure Prediction

MFE Structure Prediction

......(((((...(((.((.((....)))).))))))))........(((.(((.....((((.((((..(((..(((((.((.((..(.(((((.((((((........)))))).)).))).)..)).)).)))))..))).))))))))...((((((.................))))))...)))))).

Thermodynamic Ensemble Prediction

......(((((...(((.((.((....)))).))))))))........(((.(((..,..((((.((({..(((..(((((.((.((..(.((({({((((((........)))))).)).))).}..)).)).)))))..))).))))))))...{{{,,,....,{|,..|,.....),}))),,.))}))).