Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_DYM_0001700

Sequence Length

435 nt

GC Content

0.4391

AAGCUGUAAGGACUAAGAGGAAAAUACCAUGGCUGCUCCAUUGAUGAGCUAGCAGAUUCUAUUAUGGCUGCUCCAUUGAGGAGCCAGCAGAUUCUACCUCUGACAAAGCUAAUUUUGACACAAUACUGAGGAAAUACGGCACAAGACCUAAAUGUCAUUGAAGAAGUGAUUCGAAUGAUGUUAGAGAUCAUCAACUCCUGCCUGACAAAUUCCCUUCACCACAACCCAAACUUGGUAUACGCCCUGCUUUACAAACGCGAUCUCUUUGAACAAUUUCGAACUCAUCCUUCAUUUCAGGAUAUAAUGCAAAAUAUUGAUCUGGUGAUCUCCUUCUUUAGCUCAAGGUUGCUGCAAGCUGGAGCUGAGCUGUCAGUGGAACGGGUCCUGGAAAUCAUUAAGCAAGGCGUCGUUGCGCUGCCCAAAGACAGACUGAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-95.80 kcal/mol

Ensemble Metrics

Free Energy: -105.73

Frequency: 0.0000

Diversity: 141.59

Structure Visualization

Structure Prediction

MFE Structure Prediction

.((((((..((...............(((.((((..(((((((((.((((((((((.(((....(((((.(((....))).)))))..))).))).((((((.((((......)))).)).......))))......(((....).))...(((((.((((((((((((((((((...(((((((((((............................((((...........)))).........((.........)))))))))...))))..)))))).)))..))))..)))))))))).............((((....))))(((..(((((((........)))).)))..)))))).)))))))))))))...)))).)))..........(((..(((....)))..)))))....)))).))....

Thermodynamic Ensemble Prediction

.((((((..((....,{{((....,.{{,.,(((((((,.,,{,,||||.|||{((.{({....{{(((.(((....))).)))))..})).)}).|||||{.{{,{{,...||||}.||......,)}})......{{|....|,|,...,{|||.{(((((,,((((((((((...(((((((((((..,.......,..,|,............,,,.....,......}))}....{{...{{.........)))))))))...}})}..)))))).)))}.))))..}}})}}}}}}.........,.,,{{{{,,,,))))}}},,,{(((((((.,(.(({...}}),)).))))))))}}|,|||{|,{{{{||}||||...........,|,,}}|.}}})),)))))}},....)))).))....