Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_DYM_0014400

Sequence Length

404 nt

GC Content

0.4505

AGAUAUUACAUAUGAAAUAUCAGUAGAAGCUAUAUCAACAAUGGUUGUUUUCCUUUCCUGCCAACUCUUCCACAAAGAAGUUUUGCGACAGAGCAUCAGCCACAAGUAUUUGAUGCGAGGUCCAUGUCUUCCAUACACCAGCAAACUUGUGAAGACCUUAUUAUAUAACUUUAUCAGACAAGAAAAGCCACCUCCUCCAGGGGCCCAUGUUUUCCCUCAGCAGUCGGAUGGGGGAGGACUGCUUUAUGGACUUGCAUCAGGAGUAGCAAAGUGCCUUGUUGUAGAAAACCUUACAGUUCCGGAGUGAAAUUUGUUGUCACUGACAGGGCAGGAGGAGAAUCCUUGUACUGGAACUGCGGCUGGAUGAGUAGUGAACCACUUGCUUGGACCCUCCUAUGAGUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-104.90 kcal/mol

Ensemble Metrics

Free Energy: -113.16

Frequency: 0.0000

Diversity: 108.31

Structure Visualization

Structure Prediction

MFE Structure Prediction

.((((((........))))))....((((......((((....)))).....))))((((((.(((((...((.(((...(((((((((((.((((..((.((.....(((((((((((.(((((((((((((..............)).))))))...........................(((((..(((((((((..(((...((........))...)))...)))))))))...))))))))))))))))))))).)).))...)))).)))))))))))...)))...))...)))))........(((((...)))))))))))(((((..(((..(((.(((.(((((..........)))))...)))..)))..)))..))))).........

Thermodynamic Ensemble Prediction

.((((((.,....,.)))))).{{,{..{|},,..{{((,{,||}}|{{{{{{,.{((((((.{{{((,,.,,.{{|,,,(((((((((((.((((..((.((.....(((((((((((((((((((((((((..............)),)))))),,,.,...,......,,}..,..,}).{{(((..(((((((((,,{{{...{(,,..,,,,|}...}}}...)))))))))...))))})))))))))))))))).)).))...)))).)))))))))))...}}}.,,||,.,|||||,,......{{{||.,,}}}}}))))))|||||,,|||,}||.,|||,||||{||}.||,.|{|||||,..})),,}))}})||,.|,}}...}.}}}..