Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ELAVL1_0001000

Sequence Length

250 nt

GC Content

0.4080

GAAUGUGAGCUAUGCUAAAGGAACACCUAGAUUUGGCUCAGUCUGGAGAGAACUGGUUUUGAGAAUCAGUGAAGGCUGCAAAAGUGUAAUUUGGAAAUUANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCCCAACCAGAACAAAAACGUGGCACUCCUCUCGCAGCUGUACCACUCGCCAGCGCGACGGUUCGGAGGCCCCGUUCACCACCAGGCGCAGAGAUUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-43.90 kcal/mol

Ensemble Metrics

Free Energy: -47.98

Frequency: 0.0013

Diversity: 40.62

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((((((......(((....))).....)))))))((((((.....((((((((...))))))))..(.(((.....))).)..(((((...............................................................))))).....((((.(((.((((((((((.((((..........)))))))).))...))))))).)))).....))))))............

Thermodynamic Ensemble Prediction

.....(((((((.,{{..(((....))),}...))))))}((((((.....((((((((...))))))))..,.{{(,,...,}},}..{((((...............................................................}}}}}.....((((.(((.((((((((((.((((........,.)))))))).))...))))))).))))...,.))}))},,,....,,},.