Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ELAVL1_0002100

Sequence Length

240 nt

GC Content

0.5667

GGAUGUGAUGGCUUUCAUGAUGGCAGCGACCGUCCUCUGUCAUGCAUCACUAACUCCCAGCCAAGCACAGGGCCUGACACAUAGUAGGUGCUCAGUUAAUGCGUCAGCUCCUUGAGGACAGAGAAGAGCUUGACCAUGGAAGGUGACGGGCAGCCCAGGGGUGUGCGACUCCCUCGGUGAUGUUGGCAGGUGUGGGCAUGUGUGGUGAGGAAGAGCAUGUGGCAGAGACAAGGGCCAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-69.80 kcal/mol

Ensemble Metrics

Free Energy: -76.50

Frequency: 0.0000

Diversity: 68.61

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(..(((((((...(((((......)))))(((((((..(((((.((..((((((..((.((.(.(.(((((.(((((....(.(((((.(((((((.(((((((((((.......)))..)))).)))))))......))))))))).)((((((((.....)).)))).))..))).)).))))).).))).))..))).)))..)).).)))))))))))...)))))))..)

Thermodynamic Ensemble Prediction

.....{..(((((({...(((((......)))))(((((((((((.{{.{{..((((((.,((.((.(,{.(((((.((({{..,.,,|{{{{.{{,,,{|,(((((((((((.......}})..))))}})))|||.{,.{,}|}||,|||.((.,{||{|}}.,,,).))}),,))}}))}}),))))).),})).))..))).)))..}),)))})})))))))...}))))))..,