Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ELP3_0000100

Sequence Length

239 nt

GC Content

0.4979

GAGAUCUCAGCCCUGCUGAGCUGAUGAUGCUGACUAUAGGAGAUGUUAUUAAACAACUGAUUGAAGCCCACGAGCAGGGGAAAGACAUCGAUCUAAAUAAGGUGAAAACCAAGACAGCUGCCAAAUAUGGCCUUUCUGCCCAGCCCCGCCUGGUGGAUAUCAUUGCUGCCGUCCCUCCUCAGUAUCGCAAGGUCUUGAUGCCCAAGUUAAAGGCGAAACCCAUCAGAACUGCUAGUGGG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-55.60 kcal/mol

Ensemble Metrics

Free Energy: -61.38

Frequency: 0.0001

Diversity: 61.77

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((((((...))))))((..(((((((((.....((((.((((....))))...(((.(.(((((((.((..((((..(((......)))......(((....))).(((.((..((((....)))))).)))......))))..)).))))........))).).))).)))))))))))))..))((((((((......))).)))))....(((((.((.....)).)))))

Thermodynamic Ensemble Prediction

.....((((((...))))))|{|.(((((((((....{(({(,(({{....},}}..,{{{,{,.,,((((.((..((((..,{,......}),......(((....))).,(,,((..((((....)))),,.}))|.....)))),.)).))))...,},.,},},.,)))}))}}))))))))),.,}{{((({{{,,....}},.,,)))....(((((.((.....)).)))))