Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ELP3_0002200

Sequence Length

528 nt

GC Content

0.4489

GUUUCAUCAUGUUGGCCAGCCUGGUCUCGAACUGCUGACCUUAAGUGAUCCGCCUGCCUUGGCUUCCCAAAAUGUUGGGAUUACAGGCGUUAGCCACUGUACCCAGCCUGGAAUUUAUAUUUUAAUAAUGGAAGGUAGACAGUAAAGAAACAAGAAAAAGUAUCAGGCACUCAAAAAAUGCUAAGCAGAGAUGUAAAAUCAAGUAAGGUGAUGGCAGCUGAGAUGGUUUAGCUGUGGUCGUUAGGAAGGGAUUCUGUGAAGUGAGAUUGAAGUUGAGUCUGAAUGACAAGAAGGACCUAGUCCUAAGAAUAUGUGAAAGGGGCAUUCCUAGCAGAGAAGUCACUAGAAUGAGGCCCAAGGAAGGAAAGACAUGGGGGUGUUGUGCAGUGCAGGGGGUGAGGGAAGCAUGAGGCUGGGAGUGCAAAUGAGCUGGGGUUUGUAAGCAAAGGUAAGGAGUUUCCAUUUUAGCGUAGGAGUCAUGAGAAGCUAUUAGGAUUUAAGGCAGGGGAAUGAUACAAUCCAAUUUAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-135.40 kcal/mol

Ensemble Metrics

Free Energy: -147.05

Frequency: 0.0000

Diversity: 153.58

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((.(((((....((..((((((((((...((((..(((((......((.(((((..((...((((((....))))))...))(((....)))(((((((...((((((.((((.((((((........))))))....((......))......)))).))))))..........(((...)))..(((.....))).........(((.(((((((((....))))))))).))).(((((((((..((((((....(.(((((.......))))).)...)).))))...)))..)))))).............((((.(((((((..((....)).))))...)))))))...........(((((....))))))))))))))))).)))))))..))))))))))))))..(((((((........))))))).((.(((((..(((...)))))))).))...))...))))))))))((((.(((((.....((......))....))))))))...)

Thermodynamic Ensemble Prediction

((({,{((((,..((((,...|)))).,...((.(({.(((((,,.{{{((.((((((({.(({((((({....}))))).(((((((.(((((((.((((((((((((.,..(((((,((((,....}}}}}.}}}},..,,...,,.{{........||.||.,{(({{{......|||,..|||.,|{|}}...|}}........|(((.(((((((({....})))))))).))),(((((((((..((((((....(.(((((.......))))).).,.)),})))...)))..)))))}.....,.,....,{,{{.{{|{{,{|,.,....,|{{|.,.{{{{.{(((..,..........}.}..)))),))}),))}})),,,})))),,,},.)),}.))))))))..})))..)).))))).)))))))))).})))),,)){{{{|||||,,..|{...,,.},,))),)))))|....|||||}}}}}||}.}}.}))}}..})})|......)