Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_EP300_0000900

Sequence Length

171 nt

GC Content

0.4269

GGUUUUUCAUGGGAGAGAGAUGGGAAAGGAUGUUGGGGUUCUAUUGUGGAAAGAGAAAUAUGCUAAGGAAUUUGCCAUUUAUCUUAGCAUCAGGAUAAGAAUUGUAUGAGCAGGGGAGUGACAUGGUUGGGGAAAGACUAAUUCUGGUAACACCGUACAGAGCAGCAGUAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-25.40 kcal/mol

Ensemble Metrics

Free Energy: -29.98

Frequency: 0.0006

Diversity: 59.57

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((.........((((.((((((.(((...(.((((.(((((.((.....)).)))...)).)))).)..))).)))))).))))...((((((((.((..((...(.(((...(......)...))).)...))..)).))))))))...))).(((.........))).

Thermodynamic Ensemble Prediction

{(({({{,{{{.((((.{(((((.(((...{.((((.(((((.{(.....},.}}},..}}.)))).}..))).)))))}.))))..}||{||||{.{{.,{{,,.(,{{(...(..,,..|,.{|||{|...,,..)),)))}))},.,,,)).|{{.}..,..},))}.