Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_EP300_0001000

Sequence Length

250 nt

GC Content

0.3080

UUUAAGAGAACUGAGUUGAUUUUACUUCAUUUUACCUAAAGUACAAAGGUAAGUGUGUUUACUCAAAUAAUAUGUGAGCCUUUUAAGUAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAGGGCCAGUUCCUUCCUCAGACUCAGUUCCCAUCACAGGGAAUGAAUGUAACAAAUAUCCCUUUGGCUCCGUCCAGCGGUCAAGCUCCAGUGUCUCAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-35.50 kcal/mol

Ensemble Metrics

Free Energy: -39.78

Frequency: 0.0010

Diversity: 23.04

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((((((((((((((((((((((((((.((((.........))))))))).((((((...........)))))).....)))))))..............................................................(((((((............((...((((((......))))))....)).............)))))))(((...)))))).)))).)))).))))..

Thermodynamic Ensemble Prediction

.....((((((((((((((((((((({{{,{((((((.........)))))))}}.((((((...........)))))).....})))))),.............................................................(((((((............((,..((((((......))))))....)).............)))))))(((...))))))}}))),}))).))))..