Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_EP300_0017500

Sequence Length

240 nt

GC Content

0.4208

GAUUACUUUGAUAUUGUGAAGAGCCCCAUGGAUCUUUCUACCAUUAAGAGGAAGUUAGACACUGGACAGUAUCAGGAGCCCUGGCAGUAUGUCGAUGAUAUUUGGCUUAUGUUCAAUAAUGCCUGGUUAUAUAACCGGAAAACAUCACGGGUAUACAAAUACUGCUCCAAGCUCUCUGAGGUCUUUGAACAAGAAAUUGACCCAGUGAUGCAAAGCCUUGGAUACUGUUGUGGCAGAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-51.10 kcal/mol

Ensemble Metrics

Free Energy: -56.60

Frequency: 0.0001

Diversity: 82.69

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((((((((((((........(((.(..(((..((.((.......)).))..)))..)))))))))))).(((((..((...(((((((..((((.((((((((((.....)))).)))(((((....)))))..))).))))..)))))))...))..)))))..((((.(((.((((...............))))))).)).))...(((..............)))..))))

Thermodynamic Ensemble Prediction

.....((((((((((((........(((.(..(((..((.((.......)).))..)))..))))))))))))}{{,(({.,(((((((({({{{,{,,..||{({{(((.....}}}}.))|{{{{{....}}}}||.....,}},}}|||||,,..}))}})}}||,,((((.(((.((((.,{.........,..))))))).)).}}...}}}}}}}}}}|}}}},.))),,.}))