Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_EP300_0021400

Sequence Length

292 nt

GC Content

0.4384

UGAGGGAGAUGAUUAUAUCUUCCAUUGCCAUCCUCCUGACCAGAAGAUACCCAAGCCCAAGCGACUGCAGGAAUGGUACAAAAAAAUGCUUGACAAGGCUGUAUCAGAGCGUAUUGUCCAUGACUACAAGGUGACCAAGGGAGACAGCAAAAAUGCUAAAAAGAAGAAUAAUAAGAAAACCAGCAAAAAUAAGAGCAGCCUGAGUAGGGGCAACAAGAAGAAACCCGGGAUGCCCAAUGUAUCUAACGACCUCUCACAGAAACUAUAUGCCACCAUGGAGAAGCAUAAAGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-48.60 kcal/mol

Ensemble Metrics

Free Energy: -55.36

Frequency: 0.0000

Diversity: 73.23

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.((((((((....))))))))..((((((..(((((..(((..(...............)..)))))))))))))).......((((((...............)))))).((.((((((....((.(((......(((((..((((....)))).........................((..........)).((((......))))................((((((.....))))))......)))))......)))...))....)))))).)).))(.....)

Thermodynamic Ensemble Prediction

({,((((((({....})))))))..((((((..(((((..(((..{...............)..))))))))))))))........{((((,,,.{{{(({{.,{..,||,,.,{,(({.{{,,{,{..|||..,|..{||,,..((({....}))).........................||..........)),||||,.,,..||||,....,......,.}.{|{|||,,...))}))}......}}}))}{.....{{.{{{{{...,.,,,.,..))))}.,}.)