Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_EP300_0022200

Sequence Length

339 nt

GC Content

0.6047

GUGACCCCUCCAACCCCUCCUCAGACUGCUCAGCCACCCCUUCCAGGGCCCCCACCUGCAGCAGUGGAAAUGGCAAUGCAGAUUCAGAGAGCAGCGGAGACGCAGCGCCAGAUGGCCCACGUGCAAAUUUUUCAAAGGCCAAUCCAACACCAGAUGCCCCCGAUGACUCCCAUGGCCCCCAUGGGUAUGAACCCACCUCCCAUGACCAGAGGUCCCAGUGGGCAUUUGGAGCCAGGGAUGGGACCGACAGGGAUGCAGCAACAGCCACCCUGGAGCCAAGGAGGAUUGCCUCAGCCCCAGCAACUACAGUCUGGGAUGCCAAGGCCAGCCAUGAUGUCA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-101.80 kcal/mol

Ensemble Metrics

Free Energy: -108.58

Frequency: 0.0000

Diversity: 79.71

Structure Visualization

Structure Prediction

MFE Structure Prediction

..(((.(((((.....((((((.((((((...((((.((((..((((.......))))....)).))...))))...))))..)).))).((.(((....))).))(((....)))....................((((.((((....((((((((((.(...((((.((((((......(((((....)))))....)))))....).))))...).))))))))))......)))).)).))..(((((..((.......))..))))))))....)))))...((((..((((((((.......).)))))..))..))))((....))..))).

Thermodynamic Ensemble Prediction

.,({{.(((((.....(({(((.({((((...((((.((((..{{||}...,,,|}}}....}),))...))))...))))..)}.))),|{.(((....))).||.{{,(.((((,....{{{,....,{,,...{|{{.{(((....((((((((((.{...((({{{({(((....||((((,....,,,}}...|))))).,,,),))))...).))))))))))......)))}.)).}}..,{|||,}||..,....)))}}})))).)}...)))))...((((..((((((({.......).)))))..))..)))),,..,.},..}}}.