Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_EPS15_0001600

Sequence Length

258 nt

GC Content

0.4031

GGAAAAGAAUAAUGUGGAACAGGACCUUAAGGAGAAGGAAGAUACUAUUAAACAGAGGACAAGUGAGGUUCAGGGAAAAGAUCCAUCAACAAAUUGGAUUCUCCUGAUCCCUUUAAACUGAAUGAUCCAUUUCAGCCUUUCCCAGGCAACGAUAGCCCCAAAGAAAAAGAUCCUGAAAUAUUUUGUGAUCCAUUCACUUCUGCUACUACCACUACCAAUAAAGAGGCUGAUCCAAGCAAUUUUGCCAACUUCAGUGCU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-44.20 kcal/mol

Ensemble Metrics

Free Energy: -49.72

Frequency: 0.0001

Diversity: 79.65

Structure Visualization

Structure Prediction

MFE Structure Prediction

.............((((..(((((.(((..((.(((((..........................((((.((((((....((((((.........)))))).))))))..))))....(((((........)))))))))).)).(((.......))).........))).))))).........((((.....))))...........))))...........(((((((.....(((....))).....))))).))

Thermodynamic Ensemble Prediction

((...{{,,....{((({.((({,,(((..(,,({(((..,...,........,,{{{...,,,((((.((((((,...{(((((.........)))))),})))))..))))....{((((,{.,,,,,|}}||,||||,,,.(((.......))).....,...}}).}}))),,,.....,||||},.,}))}))))),,,....,|.,,.,,.....,},}||||.}}}}.{{,.,}}},),,.{...,,}),)