Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_EPS15_0002800

Sequence Length

236 nt

GC Content

0.4449

GGAAAAGAAUAAUGUGGAACAGGACCUUAAGGAGAAGGAAGAUACUAUUAAACAGAGGACAAGUGAGGUUCAGGUCAACAAUGAAGAUCCUUUUCGUUCAGCCACAUCGAGCUCUGUCAGCAACGUAGUGAUUACAAAAAAUGUAUUUGAGGAAACAUCGGUCAAAAGUGAAGAUGAACCCCCAGCACUGCCACCAAAGAUCGGAACUCCAACAAGACCCUGCCCUCUACCACCUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-35.90 kcal/mol

Ensemble Metrics

Free Energy: -39.89

Frequency: 0.0016

Diversity: 44.86

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((......(((((.((((..(((..((((......(((.((........(..(((((((..(((...(((....((((((((...))))))))..)))..)))..))).))))..)...((((((..((((.....)))).(((.((...((((..(((....))).))))...)).)))))))))......)))))....))))...)))..))))...)))))...)).

Thermodynamic Ensemble Prediction

.....{{......(((((.((((..(((..((((.,,.......|,......,,(,,{{({{((,.(((,..(({....((((((({...})))))))..))).,))}..})),)))}..,...((((((..((((.....)))).{((.((...((((..(((....))).))))...)).))}))))))..,,...,,,,}}..))))...)))..))))...)))))...}}.