Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_EPS15_0009700

Sequence Length

346 nt

GC Content

0.3931

UGGGUUGUAUCCCCUGCAGAAAAAGCUAAAUAUGAUGAAAUCUUCCUGAAAACUGAUAAAGAUAUGGACGGAUUUGUGUCUGGAUUGGAGGUCCGUGAAAUAUUCUUGAAAACAGGUUUACCUUCUACCUUACUAGCCCAUAUAUGGGAAAAGAAUAAUGUGGAACAGGACCUUAAGGAGAAGGAAGAUACUAUUAAACAGAGGACAAGUGAGGUUCAGGAAGAUCCAUUUAAUGUAGACUCAAGUUCGCUGACAGGUCCAGUUGCAGAUACAAACUUGGAUUUUUUCCAGUCUGAUCCUUUUGUUGGCAGUGAUCCUUUCAAGGAUGAUCCUUUUGGAAAAAUCG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-74.70 kcal/mol

Ensemble Metrics

Free Energy: -83.33

Frequency: 0.0000

Diversity: 83.35

Structure Visualization

Structure Prediction

MFE Structure Prediction

.((..((((((.(((((((..(((((((.....((((..(((((((((((..((.((.(((((((..((((((((.((.......)).))))))))...))).))))........((((.((((((.(((((....((((....)))).............((.......)).))))))))))).))))...................)).)).))))))))))).)))).....))).))....))..))).))))..........))))))..))..(((((((.((((...((((...((.((((.((.....)).)))).)).))))...))))))))))).

Thermodynamic Ensemble Prediction

.((((((((((.{((((((..,,(((((.....((((..(((((((((((..((.((.,{(((((..((((((((.{{,,.....}}.))))))))...}))}}|||.....,||{(((.((((((.(((((,,..{((({,,.|},,.......,.,}}}}}....,.....))))))))))).}))}.,,................)).)).))))))))))).)))).....))).))....)).,|||.}}}}..,,,,,},,))))))},))},((((((((((((...((((...((.{{((.{{.....)}.}))),)).))))...))))))))))).