Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_EPS15_0010000

Sequence Length

409 nt

GC Content

0.4156

AUGCAAAUGAAACUGAUGGAAAUGAAAGAUUUGGAAAAUCAUAAUAGUCAGUUAAAUUGGUGCAGUAGCCCACACAGCAUUCUUGUAAACGGAGCUACAGAUUAUUGCAGCCUCAGCACCAGCAGCAGUGAAACAGCCAACCUUAAUGAACAUGUUGAAGGCCAGAGCAACCUAGAGUCUGAGCCCAUACACCAGGAAUCUCCAGCAAGAAGUAGUCCUGAACUACUGCCUUCUGGUGUGACUGAUGAAAAUGAGGUGACUACAGCUGUUACUGAAAAAGUUUGUUCUGAACUCGACAAUAAUAGACAUUCAAAAGAGGAAGAUCCAUUUAAUGUAGACUCAAGUUCGCUGACAGGUCCAGUUGCAGAUACAAACUUGGAUUUUUUCCAGUCUGAUCCUUUUGUUGGCA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-91.20 kcal/mol

Ensemble Metrics

Free Energy: -97.75

Frequency: 0.0000

Diversity: 124.32

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(((((((..(((((((....((((.............))))....)))))))..)))..))))(((((((.....(((....)))....)).)))))...(((((((.((..........)).)))))))....((((((...........((((((.(..((((((((.((..((((...((((((.((.(((..((..((((.(((.((((((.....))))))..))))))).))..))).))...))).))))))).(((......)))....)).))))))))..)))))))...............((((((((((((((.....((((..(((((.(..(((....)))..).))).)).))))....)))))))............))))))))))))).

Thermodynamic Ensemble Prediction

.(((({((..(((((((....((((.............))))....)))))))..})}..}))}(((((((.....(({....)))....)).)))))...{((((((.((..........)).)))))}}....((((((.,,,.......{||||,.({{(((({(,,.....,|||}}.|||{{{.((.(((..{{,.((((.(((.((((((.....))))))..))))))).))..))).)}...})).}|||||,.,,|..}}}}))}...,||{||||||||{{||,|||,......,(({{(...{{{,(((...|}}.}}}}}|||,..{,,,.,|,.,||,...,))}.)})),}))}.)))})}})|||||..,}}},,,,,},}},..,,)))))).