Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_EPS15_0011700

Sequence Length

245 nt

GC Content

0.4408

CCUCAGCACCAGCAGCAGUGAAACAGCCAACCUUAAUGAACAUGUUGAAGGCCAGAGCAACCUAGAGUCUGAGCCCAUACACCAGGAAUCUCCAGCAAGAAGUAGUCCUGAACUACUGCCUUCUGGUGUGACUGAUGAAAAUGAGGUGACUACAGCUGUUACUGAAAAAGUUUGUUCUGAACUCGACAAUAAUAGACAUUCAAAAGAGGAAGAUCCAUUUAAUGUAGACUCAAGUUCGCUGACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-48.30 kcal/mol

Ensemble Metrics

Free Energy: -53.77

Frequency: 0.0001

Diversity: 71.01

Structure Visualization

Structure Prediction

MFE Structure Prediction

(..........)(.((((((((....................((((((.(..((((((((.((..((((...((((((.((.(((..((..((((.(((.((((((.....))))))..))))))).))..))).))...))).))))))).(((......)))....)).))))))))..))))))).......(((((...(((.(((...))).)))))))).........))))))).).)

Thermodynamic Ensemble Prediction

({((((({...,({,,,((,.....,....,.,...}}....}}}}},,|}(,,,((({{.,{.{(((({{.{(((((.((.(((..({..((((.(((.((((((.....))))))..))))))).))..))).))...))).))),,},...,{{|||{,||....{{{{{|,,.,)}})}.,,)}.,}}}}}{((((..,{{{.(({...))).))))))))}}}})).,))).))),...)