Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_EPS15_0020700

Sequence Length

393 nt

GC Content

0.4275

GCCAUGUUUUUGGUAUACUGUGCACUGGAGAAAGAACCUGUGCCAAUGUCCUUGCCUCCAGCCUUGGUGCCACCAUCUAAGAGAAAAACGUGGGUUGUAUCCCCUGCAGAAAAAGCUAAAUAUGAUGAAAUCUUCCUGAAAACUGAUAAAGAUAUGGACGGAUUUGUGUCUGGAUUGGAGGUCCGUGAAAUAUUCUUGAAAACAGGUUUACCUUCUACCUUACUAGCCCAUAUAUGGUCAUUAUGCGACACAAAGGACUGUGGGAAGCUUUCAAAGGAUCAGUUUGCCUUGGCUUUUCACUUAAUCAGUCAGAAGUUAAUCAAGGGCAUUGAUCCUCCUCACGUUCUUACUCCUGAAAUGAUUCCACCAUCAGACAGGGCCAGUUUACAAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-89.50 kcal/mol

Ensemble Metrics

Free Energy: -98.71

Frequency: 0.0000

Diversity: 130.77

Structure Visualization

Structure Prediction

MFE Structure Prediction

((...))((((.(((.((((.((.((((((.(((.((.(......).)).)))..)))))).(((((((....)).))))).....(((((((((((((.....)))))................(((((.(((((.......((((....((((((((((((((.((.......)).))))))))(((.((..((((....))))..))..)))............))))))...))))........((((......))))))))).))))).((((((((..(((((((((((((.(((.....))).)))))))).....))))))))))))).))))))))......((((...((((......))))..)))))))))).))).))))

Thermodynamic Ensemble Prediction

(({,.,|{{,|}||,.,,((,(,,((((((,({({((,({{..{{|.||,|||{{||||||{(,((((,..,})),|,,,,,,,...,,({(((.,,,,.,,},,||,......,}.......{{({((({(((((......,{.....}},|,,|||,||||}}.|))).}}.}))})))),,},||..,,..,|||...,))))},}...})},.,,......,.|||,...,||||.......},}.},||||||,||||||,,.,,,,..((((((((,.{((((((((((((.(((.....))).))))))),....,))))))))))))).),))))))))).,,((((...((((......))))..)))))))))).))),.,,}