Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_EPS15_0022600

Sequence Length

360 nt

GC Content

0.3917

CAUGAUACCAGUAGUCCUUUGCUAAUCAGUGGAACCUCUGCAGCUGAGCUCCCAUGGGCUGUAAAACCUGAAGAUAAGGCCAAAUAUGAUGCAAUAUUUGAUAGUUUAAGCCCAGUGAAUGGAUUUCUGUCUGGUGAUAAAGUGAAACCAGUGUUGCUCAACUCUAAGUUACCUGUGGAUAUCCUUGGAAGAGUUUGGGAGUUGAGUGAUAUUGACCAUGAUGGAAUGCUUGACAGAGAUGAGUUUGCAGUUAUUUUCCUCAUUUUCCACAAGAGCCAGAUGAAAUAGGCAGAAUACAUAUUACCACAUUUUAAAAAUGCAGAAAGAGAAACUUAAAGUGACUUGAAUUCUUGUUCACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-78.00 kcal/mol

Ensemble Metrics

Free Energy: -85.87

Frequency: 0.0000

Diversity: 120.21

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((...(((((....))))).))).((((....(((((..(((.((((...((((((......(((.......))).(((((((......)))))))........))))))((((((..(((((((((.(((..((..(((....(((((((((((((((((((.((..((..((....))..))..)).))..)))))))))))))))))..)))..))....))).)))))))))..))))))........................))))))).........)))))..........)))).........)))(.(((.(((((..((((......)))).))))).)))...)

Thermodynamic Ensemble Prediction

({(({{...(({((,,,.||||}.,}}}|((({,..{{|{{{|{{|||,|,,{,((((((.,{{,.(((.......))).(((((((......)))))))....}},.)))))){||,{|}}{(((({((({(((,.{...{{{....((((((((((((((((({(.((..((,.((....))..))..)).))..)))))))))))))))))..|||,.||{,,,}}|,|}|}|||||,,}}}}}},,,,||,||,||}}|,|},,,}..,.|||}},,},..,.})}}}},......,,.,,.{,,,,.....}))|.||,.{{{{,..||||,},,.,}}}|,}))}}}))).,,)