Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ERBB2IP_0001400

Sequence Length

225 nt

GC Content

0.5600

AUCCUCGUUGGGGCUGGGAAACUCCUGCAAAACUCGAGACCAGGAAGCCAGCCCGCACCCCAACCCCCACCAAAGCCACCUACUCUUCUUCUGUGGGAGGCCAGUCCACAUCCGCUCUCACCCGAGAGAGAUAUUCAGCUGGAUCCAAAGUGACUGAUGAAGGGAAGGAAAUCAUGUCAAGCGAAGCCUUGAAAAAGCUGCCCUGAGACGGUGUCCCGCCGAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-56.10 kcal/mol

Ensemble Metrics

Free Energy: -60.39

Frequency: 0.0010

Diversity: 48.19

Structure Visualization

Structure Prediction

MFE Structure Prediction

......(((((((.((((...((((((.............)))).))....))))..)))))))..........(((.(((((.........))))).)))(((((.((((((((((((......))))).........))))).....)))))))....((((.((.........(((((......))))).....)).))))....(((((...)))))....

Thermodynamic Ensemble Prediction

...,,,(((((((.((((...{(((((.............))))).}....)))}..))))))).,,.......(((.(((((.........))))).)))(((({,((((((((((((....,,)))}}........,})))).....)))))))....,|||.,(|........(((((....,,}}))}....,)).)))),,,,(((((...)))))....