Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ERBB2IP_0001600

Sequence Length

305 nt

GC Content

0.5148

AUCCUCGUUGGGGCUGGGAAACUCCUGCAAAACUCGAGACCAGGAAGCCAGCCCGCACCCCAACCCCCACCAAAGCCACCUACUCUUCUUCUGUGGGAGGCCAGUCCACAUCCGCUCUCACCCGAGAGAGAUAUUCAGCUGGAUCCAAAGUGACUGAUGAAGGGAAGGAAAUCAUGUCAAGCGAAGCCUUGAAAAAGCUGCCCUGAGACGGUGUCCCGCCGAAAGAUCCUCCAGGAAAAAGUAAAGUUCCUCGUGACUGGAGAGAACAAGUACUUCGACAUAUUGAAGCCAAAAAGUUAGAAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-74.60 kcal/mol

Ensemble Metrics

Free Energy: -79.18

Frequency: 0.0006

Diversity: 63.32

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((..(((((((((((.....(((((.............)))))..)))))))....................(((.(((((.........))))).)))...........(.(((((....))))).).....)))).))))(.....(((((..((.((((.((.........(((((......))))).....)).))))....(((((...))))).....((((((((..(..((........))..)..)))))).)).......((((((....)))))).))...))))).....)

Thermodynamic Ensemble Prediction

((((..((((((({(((,...,(((((.............))))).,}}}}))),..,,,,,,}..........(((.(((((.........))))).))),,{,....,,,,.(((((....}}))),).....},}),)))){.....{{(({,.,,.{(((.,(,........(((((....,.})))).....)).))))....(((((...)))))...,.((((((((..(..((........))..)..)))))).)).,.....((((((....)))))).,....})))}.....)