Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ERBB2IP_0012500

Sequence Length

250 nt

GC Content

0.3160

CUUUAUUUUCAGCUUUGCUUAUGUAUAUUAGGAACCAGCUCAAUCAAGAGCCCAGCAUUUAAAAAAACAAUCCUUGGCCUGUGGGGUGGCUCAAGCCUGUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUUCUGAGCAUUCUUUAUUAGAUCCUCCAGGAAAAAGUAAAGUUCCUCGUGACUGGAGAGAACAAGUACUUCGACAUAUUGAAGCCAAAAAGUUAGAAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-34.90 kcal/mol

Ensemble Metrics

Free Energy: -39.20

Frequency: 0.0009

Diversity: 57.91

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((((((((((((((..((((...........((((......))))((((..................))))((((.((((.(((....)))......................................................(((((..........))))).))))))))...(((((..(((((((.......))).))))...)))))....))))..))))...)))))).))))).

Thermodynamic Ensemble Prediction

.....(((((((((((((((..{{,,..,,{{.....((((......)))){,,,.............,,..||{||((|,.|||,,|||.,,,)}},,....................................................{(((({...,,,...,,))),|}}|}})),..,{{{{..(((((((.......))).))))...}}|||,,|.}}}),,)))}...)))))).))))).