Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ERBB2IP_0018300

Sequence Length

354 nt

GC Content

0.3785

AUUAAAGAAUUUACCCUUUAGCUUUACAAAGCUACAGCAAUUGACAGCUAUGUGGCUCUCAGAUAAUCAGUCCAAACCCCUGAUACCUCUUCAAAAAGAAACUGAUUCAGAGACCCAGAAAAUGGUGCUUACCAACUACAUGUUCCCUCAACAGCCAAGGACUGAGGAUGAUGAUACAAAGGAAACAGAUUCUUUAUCAGAUGAAGUUACACACAAUAGCAAUCAGAAUAACAGCAAUUGUUCUUCUCCAUCUCGGAUGUCUGAUUCAGUUUCUCUUAAUACUGAUAGUAGUCAAGACACCUCACUCUGCUCUCCAGUGAAACAAACUCAUAUUGAUAUUAAUUCCAAAAUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-59.10 kcal/mol

Ensemble Metrics

Free Energy: -69.31

Frequency: 0.0000

Diversity: 81.46

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((..........((.((((((....)))))).))....(((.((((....)))).)))....(((((.........)))))............(((((((((.(((((.(.((......((((....))))...........(((((............))))).....((((..(((((......)))))))))(((((.((......(((((.((.............)).)))))....)).))))).)).).))))).))))))))).))))).((((((((((...((....))....))))).....((((.......))))..................)))))

Thermodynamic Ensemble Prediction

,{(((((........||}|||{{,....,|||||,||{...,,,.,|||..}})))).}}|{,..(((((.........)))))...,........(((((((((.(((((.(,({(((...((((....)))},{.....,,,.(((((....,....,..)))))....((((,..(((((......)))))))))}((({..({{,.....,,},|}.,},{(((.((,,,...})))).)})}.,.))).)).).))))).))))))))).,,..{(((((.(((((...,(....,},...))))).}.})))|........,,...,{{{,.,,.........})}))