Sequence Details

BLAST PRIMER
Symbol
hsa_ERBB2IP_0019200
Sequence Length
396 nt
GC Content
0.3939
UCCAAACCCCUGAUACCUCUUCAAAAAGAAACUGAUUCAGAGACCCAGAAAAUGGUGCUUACCAACUACAUGUUCCCUCAACAGCCAAGGACUGAGGAUGUUAUGUUUAUAUCAGAUAAUGAAAGUUUUAACCCUUCAUUGUGGGAGGAACAGAGGAAACAGCGGGCUCAAGUUGCAUUUGAAUGUGAUGAAGACAAAGAUGAAAGGGAGGCACCUCCCAGGGAGGGAAAUUUAAAAAGAUAUCCAACACCAUACCCAGAUGAGCUUAAGAAUAUGGUCAAAACUGUUCAAACCAUUGUACAUAGAUUAAAAGAUGAAGAGACCAAUGAAGACUCAGGAAGAGAUUUGAAACCACAUGAAGAUCAACAAGAUAUAAAUAAAGAUGUGGGUGUGAAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-71.70 kcal/mol
Ensemble Metrics
Free Energy: -80.16
Frequency: 0.0000
Diversity: 92.65
Structure Visualization
Structure Prediction
MFE Structure Prediction
((......(((((....((((((....(((.....))).(((.(((......((((....)))).((.(.((((((((((.(((..((((..(((((...((((..((......))..))))...)))))..))))..))))))).)))))))))........))))))(((((.((((((..(((.......))).........(((((....))))).(((..(((.((((....)))).)))..).)).....))))))))))).......(((((.....(.((((........................)))).)))))).)))))).)))))....))(((.(..((((((.........................))))))...).)))
Thermodynamic Ensemble Prediction
((......(((((...,((((({....{,,..,..,|}.(((.{((,.....|||{.,,.,}},.,,.,.(((((((((,,(((..((((..(((((...((((,,((......)),.})))...)))))..))))..))))))).))))))}})}...,,,.)))|||({(((.((((({..{{(,.,....,},.........(((((....))))).(({..(((.((((....)))).)))..}.)),,,..)}}}))))))}.......(((((....,(,({({.....|||..,,....,,......))}}.}))))}.}})))}.)))))....))(((.{..((((((....,{,.....,,,..........)))))).,.}.)))
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