Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ERBB2IP_0024600

Sequence Length

222 nt

GC Content

0.4730

GCAUCUGUGGCAAGGCAUCCCUCUAGAGAACAACUAAUUGAUUACUUGAUGCUGAAAGUGGCCCACCAGCCUCCAUAUACACAGCCCCAUUGUUCUCCUAGACAAGGCCAUGAACUGGCAAAACAAGAGAUUCGAGUGAGGGUUGAAAAGGAUCCAGAACUUGGAUUUAGCAUAUCAGGUGGUGUCGGGGGUAGAGGAAACCCAUUCAGACCUGAUGAUGAU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-51.90 kcal/mol

Ensemble Metrics

Free Energy: -56.52

Frequency: 0.0006

Diversity: 67.71

Structure Visualization

Structure Prediction

MFE Structure Prediction

((..((......))))(((..((((((((((((.............((..((((...(((((......))).......)).))))..))))))))).)))))....((((.....))))........((((((((((..(((((......)))))...))))))))))....((((((((..((...(((..........)))...)).))))))))..)))

Thermodynamic Ensemble Prediction

((..{{.,,,..|||}{{{..{(((({{{{(({....,,|..,,.,{({.((((...{{({{...,,,))},,........||||,,||||}}||||,}}}}....((((.....)))).......,|||{{{{|||,.|||||,.....}||||,..}})))))))).,}{((((((((..((...{((,{.......,)))...)).)))))))}..}})