Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ESR1_0005300

Sequence Length

250 nt

GC Content

0.4240

GGAUACGAAAAGACCGAAGAGGAGGGAGAAUGUUGAAACACAAGCGCCAGAGAGAUGAUGGGGAGGGCAGGGGUGAAGUGGGGUCUGCUGGAGACAUGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGUUUUUCUGCACAAGCUCUUCUUCUCUUGUCUGCCACCAUGUGAGAUGUGCCUUCCACCUUCUGCCAUGAUUGUGAGGCCUCCCCAGCCACAAUGGAACU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-45.05 kcal/mol

Ensemble Metrics

Free Energy: -50.18

Frequency: 0.0002

Diversity: 63.23

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((.....((........)).......))).......((..(((.........(((((((((((((((.((((.(((((.(((.((((((.......................................................))))))..)))...))))).)))).))..))))))..(((.....))).((((..(((..((......))..)))))))))))))).......)))..))

Thermodynamic Ensemble Prediction

({...{,......((.....,,.||,....,{||,.....},|{,.{{(......,..(((((((((((((((.((((.(((((.(((.(((((,.......................................................}}}}})),}))...))))).)))).))},)))})).,|||.....}}}.({{{,.|{{..{{......)}..)))})))))))))}.{|,...)))..))