Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ESR1_0006100

Sequence Length

300 nt

GC Content

0.3400

AUAUUCGUGUCCUUUGGCCAUUUUUGAUUAGCUUAUUUGUUUUCUUCCUUUUGAAUUGUUUGAAUUCCUUAUGUAUUUUGAAUAUUAACCCCUUAUUAGAUUUAUGGUUUGCAAAUAUUUUCCCCCACUCUGUGGGUUAUCUUUUCACUUUGUCAAUUGUUUACUUUGCUGUGCGGAAAGCUUUUUAGUUUCAUGCUAUCAAACUAAUUUUGCUUUUGUUGCCUGUGCAUUCAAGGUUGUAUCCAAAGAACUCAUUGCCCAGAUCAAUGUCAUGGAGCAUUUCUCCUAUGUUUUCUUCUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-42.20 kcal/mol

Ensemble Metrics

Free Energy: -48.59

Frequency: 0.0000

Diversity: 71.59

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((..((((.....((((((.((((((.((......(((((..........(((((.....)))))............))))).......)).))))))...)))))).....)))).....(((((...)))))..........................((((((.((((((((((((...(((((((.........)))))))....)))))......)))))))..)))))).))))(..(((((..((((((((((((....))).))).)))........)))..)))))..)

Thermodynamic Ensemble Prediction

......,.((.((((((.((.,{((((..,({......|},.,,........||{.((((((,{..{{....{,{.,{{,||||.........}}},,})..}},))....))))))......(((((...)))))...............,...,......,,,,{(,,({(((((((((...(((((((.,.....,.)))))))....))))),..,,}},}}))).,))))),})...)))))).)).}......((((..,,.,.(((((((.....)))).)))..,,..))))