Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_FAM120A_0004600

Sequence Length

212 nt

GC Content

0.4906

GAAAUCACAUUCUGCCUGAUGAAGAUCUGGCUUCCUUUCACUGGAGUUUACUUGGUCCAGAACAUCCACUAGCCUCACUAAAGGUCCGGGCCCACCAGCUGGUCUUGCCACCUUGCGACGUAGUGAUCAAAGCCGUUGCUGACUAUGUACGCAACAUUCAGGACACCUCUGACUUGGAUGCCAUAGCUAAAGAUGUUUUCCAGCAUUCACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-51.50 kcal/mol

Ensemble Metrics

Free Energy: -54.45

Frequency: 0.0084

Diversity: 43.51

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.............)(((.((((...((((..........(((((.(......).)))))((((((...((((.......(((((...(((..(((....)))...))))))))((((((((((.(.(((.....))).).))))))).)))..((((((((.((....)).)))))))).....))))..))))))..))))..)))))))

Thermodynamic Ensemble Prediction

(,,..........,}(((.((({..,{(({,.........(((((.(......).)))))((((((...((((........{(((..{((({.,,,....)))}}.)}}}}}|(((((((((((.(.(((.....))).).))))))).)))),((((((((.({....)).)))))))).....))))..)))))),.))))..)))))))