Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_FAM120A_0008800

Sequence Length

272 nt

GC Content

0.4485

GGUGAAAUCAAAAUUGCUGUUUCUAUUGAAGAUGAAGCCAACAAGGACCUGCCUCCGGCCGCUCUGCUCUAUAGGCCAGUUCGUCAGUAUGUUUACGGAGUCCUGUUUAGUUUGGCAGAAAGCAGAAAGAAAACUGAGAGACUUGCUUUUAGAAAGAACAGACUUCCACCAGAAUGCGUCCAAGAGGAGUUAUUUCCACCCCAGUGAUUAGAACAUUUGGAAGAGGUGGAAGGUACUAUGGCAGAGGUUACAAAAACCAGGCAGCAAUUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-61.80 kcal/mol

Ensemble Metrics

Free Energy: -68.95

Frequency: 0.0000

Diversity: 63.73

Structure Visualization

Structure Prediction

MFE Structure Prediction

(......)(..((((((((((((....)))......((((...((.((((.((((.((.(((((((.((((.((((.((((..(((((...(((.(......(((((......)))))......).)))...)))))..)))).)))).))))(((......)))....))))..))).))..)))).......((((((((((((.......)).))))....)))))))))).)).))))...((((.....))))..)))))))))..)

Thermodynamic Ensemble Prediction

(......)(..((((((((((((....,,,,.....(((,...,|,.,{{,(({{.{(|({{((({.((((.((((.((((..(((((.,.(((.,.,..,.(((((......)))))....}.,,))....)))))..)))).)))).)))).}|,.....{{{{{,,|.||,,|},{||..,,))},.,,}||{{{{(((((((.......))})}))....))))))))},.}}.}))),}.((((.....)))).})))))))))..)