Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_FAM120A_0009400

Sequence Length

317 nt

GC Content

0.3943

GACAGAGGCCCAGCCAGCUGCACUUAUUAGUUGAUCAUGGAGCAUGGGUAUUUUCUGCACUGUAGUUUAGUACUUCUUUGCCAAUGGUAGUUUAGUACUUCUUCAAUGGUAAAUGAGAUUUUAAAAGGAUUUCAUAAACAUUUAUGUCUUUUGCUAUUGUGUGUAUUACCCUUAGAGCAGUGUGCAGCAGGCAGUGAAAGAAUGAAUAAUUGGUUUAGGUACACACAACUUAUUGGAGAUGAAGACCCGGUUUGGUGCGUCAGAAAAUUAAACUUUGUUGUGUGAGGGUGUGCGUAAGUGCUGAGAUGCUUUGAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-68.70 kcal/mol

Ensemble Metrics

Free Energy: -76.29

Frequency: 0.0000

Diversity: 142.00

Structure Visualization

Structure Prediction

MFE Structure Prediction

..((((((((((((((((((.......))))))........)).)))))..((((.(((((........((((.(((((((((((((.((((((((..((((......((..((((((((((...))))))))))..)).(((((.(((.......(((((((((.....((((((.((((......((..(.......)..))....)))).)))))))))))))))......))).)))))(((.((......)).))))))).)))))))))))))).))))))).))))...))))).))))..)))))....

Thermodynamic Ensemble Prediction

..((((((({(({((,{{{({{{,...,,,|||,{{{{|,{||.||{||,{(((({((({{{,{,,,.,(((((,,,((((({{{||}||{.,|||}}|{{{{{{(({{{..((((((((({...})))))))))..,},{{{{{,{{{{{{{{,.{((({((((..,,.{{{{{{.{{|{},,,,,||..|,,,,,,,},,)),,,.)))),)}}))))))))))})},,}})))))),}},|||||,,,,}}))),}}))},,,)),,,}))}}))),,))})))},)))},.,,)})),},}.,,))))}....