Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_FAM169A_0004000

Sequence Length

250 nt

GC Content

0.3680

CCAAUAUCUGCAAGGAGAUCCAGAAAUGCCUAGGGUUUACAUCUCCCUGGCAAGGGCCCUACAAAUGACUCCUGGUACAGAAGUUUAAAGUCUCCAGCUUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAUUCACUGACAGCUGUGGCACUUUACCUUGCUGAUCAGUGGUGGGCUAUUGAUGAUAUUGUGAAAACAUCUGUUCCUUCAAGAGAGGGGCUUAAGCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-50.10 kcal/mol

Ensemble Metrics

Free Energy: -53.36

Frequency: 0.0051

Diversity: 34.24

Structure Visualization

Structure Prediction

MFE Structure Prediction

((....(((..((((((...((((..((((.((((.........))))))))..(((((........(((.(((((.((((((..((((((((.(((((...............................................................))))).)).)))))).))).)))))))).))))))))...........(((....)))))))))))))..)))....))((.....))

Thermodynamic Ensemble Prediction

((....(((..((((((...((((..((((.((((.........))))))))..(((((.,,....{(((.(((,..}}}.}}}}..{(((...,,}}},.......................................................((((((((((.|.({....,},)}..)))).)))))))})))))...........{((....)))))))))))))..))).,..))((.....))