Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_FAT3_0000200

Sequence Length

250 nt

GC Content

0.4120

GGCUCCCGAAUCCCUGCUCCUUUUUGUCCUCUUUUGCUCUUGCUUGGUGUGACAUGCCUCUUCUGCAACUGCUGAAGUAAUUCACCGCACGUUUUCACUCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGUGACUGCUCGAGAUGAAGACUCCGGAAGGGAUGGAGAGAUCCAGUACUCCAUCAGGGAUGGCAGUGGUCUUGGAAGGUUCAGUAUAGACGACGAGAGUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-48.56 kcal/mol

Ensemble Metrics

Free Energy: -51.38

Frequency: 0.0103

Diversity: 69.83

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((.((((..(((((((.......(((((.....((....))...(((((........((((.((....)).))))........)))))((((((((((............................................................))).))))))).((....))(((((((..........))))))).)))))))))).))..))))..))))((.(...(....)...).))

Thermodynamic Ensemble Prediction

(((,.,,,,..,{{{|||(,(({{((((,(((,,,(({,..||...(((((........((((.((....)).))))........))))}((((((((((............................................................))).))))))).{|,,,,))|{(((({...,,,,.|,|||||||.,}))}))})),)},,}})}..)}}}{|,|..,}}.}})}}}),})