Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_FAT3_0009800

Sequence Length

210 nt

GC Content

0.4333

GUUGUACAGCUCAGAAGCAGUGGAAAAACCAGCAUUCUUAUGGCAAACCUGUCUGAUCCAGAAGCAAUGUUUUUCUCUUACUCUCUACUGUUGUGAAGAUGGCUCUUUGAAGGCACUGUCUGAUCCUUCUUGAGCUUCUGCACAGUUCCUAGUUGGGAGCUGAGUUACUCUUUCAGAUCAUAGAGAAGUCUCAUUCUUGGCAACCAAACU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-46.90 kcal/mol

Ensemble Metrics

Free Energy: -51.86

Frequency: 0.0003

Diversity: 55.93

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((............)))(((((((((((..((.((((...((((....))))......))))))...))))))))....(((((.(((((((((.(((.(((((...(((((..(.....)..)))))..)))))))).)))))....)))).)))))(((((.......)))))......(((....)))....((((...)))))))

Thermodynamic Ensemble Prediction

(((((,{{(,,.{{,|{|(({((((((((..((.((((,..((((....))))..,...))))))...)))))))}....|||||}|}}}}{(((.(((.(((((...(((((..(.....)..)))))..)))))))).)))|((((((....))))))|(({,,.{({(,,........)))),}},)}},...,,}))}})......