Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_FAT3_0010200

Sequence Length

526 nt

GC Content

0.4734

GUGACUGUGACAGAUGGUGGUCCCUCUCCAAAACAGUCAACCAUUUGGGUGGUGGUUCAGGUUCUAGAUGAAAAUGACAACAAGCCCCAGUUCCCAGAGAAGGUCUACCAGAUCAAGCUGCCAGAACGUGACCGAAAGAAGAGAGGAGAACCGAUUUACAGGGCUUUUGCAUUUGAUAGAGAUGAGGGCCCCAACGCAGAAAUCUCCUACAGUAUUGUGGAUGGGAAUGAUGACGGAAAGUUCUUUAUUGACCCUAAAACUGGGAUGGUUUCUUCUAGAAAGCAGUUUACAGCAGGCAGUUAUGACAUCCUAACGAUAAAGGCAGUGGACAAUGGGCGCCCACAGAAAUCCUCCACGGCCCGCCUCCACAUUGAAUGGAUUAAGAAACCACCCCCUUCACCUAUACCAUUGACCUUCGAUGAGCCGUUUUAUAACUUCACAGUCAUGGAAAGUGAUAGAGUGACUGAAAUUGUAGGGGUGGUGUCUGUGCAGCCAGCUAACACCCCUCUGUGGUUUGACAUAGUUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-134.30 kcal/mol

Ensemble Metrics

Free Energy: -144.51

Frequency: 0.0000

Diversity: 181.65

Structure Visualization

Structure Prediction

MFE Structure Prediction

(...((((.(((((((((((.((.((((.................(((((((.((((((..(((.....)))..)))......))))))...)))))))).)).)))))...((((((((((.....((((.(........((((((((.((........(((((((..(((((.....))))))))))))...((((..(.(((((((((....)))))..)))).)..)).))......((......))(((.......)))..))))))))))........).))))....))))))).))).((((...((((.......(((((...(((((....................)))))..)))))))))...))))......((((((((............((((((...))))))((.((((((((.((((..((....))..)))).)))))))).)).........)))))))))))))))))))((((((.((..((.....))..))...))))))

Thermodynamic Ensemble Prediction

({{{((((.,,((({(({{{.||.|||{....,},}}}..,,,,,(((((((.((((((..(((.....)))..)))......))))))...))))))}}.||{||,}},|.|{{{((((((.|...{{{{,,........{{(((({{,{{........(((((({..(((((.....)))))}))))))...,,{{....||{{({(({....}}))}..||||,|{{||{||....,,}}.}}}}}..{((.......))).||}|||||}}}......|.},}},}.,,.}))}}}}.}}}..,{{|..|,,,...||,.(((((...{((((.......{.....,},....)))))..))))),,}}..,}}},..,,,,||||{|||.,,|,,..,,.,((((({...)))))),{.,((({{{,.{{{{..((,,,,|}..}}}}.})}}})))}}),....,,,|||||||}}|}|||}}}}}}|||{{{.||,,||,,{{{|}..},.,,)))}))