Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_FAT3_0011100

Sequence Length

287 nt

GC Content

0.2997

GUAUAGAAGCUGAACUGCUUUGAAUAUAUCUCUUUUGUAAAUUUGACUUUGGUACCUUUAUAUAUAAUAUUAAAUUAAAUAUUUAAAAAGCAAGUCUAAAAUUUGAACACAAGUGGAAACAAAUGAUGUUAGAUGCAUAUCUAGUUGGUGGCACAUCUACACAGAGAAGAACUAUUCUAAGUGACUUUAAACAUGCUGGUUUGACUUUAUAUUCCUAGUUGGAUAAAUUCCUGGUUAUUCUUGCUUGUUCUUCUUAAACCUGUAUAGCACCUGAUAGAAAGUAGAUA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-44.10 kcal/mol

Ensemble Metrics

Free Energy: -51.02

Frequency: 0.0000

Diversity: 77.63

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((((......))))).....(((((((((..((((((((((((.(.(......((((.((((.....)))).))))......).))))))..)))))))((((((..((....))..)).))))(((((..((((.....))))...))))).(((..((((......))))..)))......((((.((.((..(((((......(((.....))).........)))))..)).)).))))..........((((.(((...))))))))))).)))))

Thermodynamic Ensemble Prediction

.....(((((......))))).....((((((((({.{((((({(((({{(.{...,,,({((.((((.....}))).))))..,...}.))))))..})))))}.,{{{{.,({....)}..}}.|||{(({((,.{(((.....||||...,}}}}},|||(((((((((.......{(((({{,,{,{{..{{.{|,,|||,,......{{{..,..)||.........)))))},,,.,,..))))))))}....||||.|||,,.),,}))))))).)))))