Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_FAT3_0014300

Sequence Length

274 nt

GC Content

0.3832

GGGAGGGAAGCAGGAACAGUCAUAAAACAGUGAGUGUUUUCAACGUGCUGGGUAAACUAAGAAUAAUUUCAAACAGUCAUCCACAGAGACAAGCAGCCUUACCUUAGGUCAUUUUCCCAUUUGUCAGCAACUAGCAACAAAUGGAUACUUAUUAAUUUAUGUAAUCAUUCAAUCUAUAAAUCCUUGCUGAAUUUUUUGCAUGUGCUGAGUCCUUUUCCCAGAGUACAAAAUGAGAAAGGCAUAGCCCUUGUCUUCAAGGCAAAUACAGAAACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-50.50 kcal/mol

Ensemble Metrics

Free Energy: -56.15

Frequency: 0.0001

Diversity: 78.55

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((((..((((((((.((((......)))).)))))...(((((((((.....))).(((....))).....(((.((....))))).((((((((......)))).......((((((((..((.....)).))))))))....((((..(((.(((....)))..)))..)))).....)))).........)))))).)))..))))))))(...................(((...))).((((((...))))))...........)

Thermodynamic Ensemble Prediction

((((((((.,((((((((.((((......)))).)))))...,{{{{{((((,..,{{..(((....)))....,||,,|}}..,}||}}.,{,.((((......)))).......((((((((..((.....)).)))))))).....{{,..,,,,{{(,,..,||..|....,,,,....,}}}),,,,,,,},)))))},))}..}}}}}}}}|{...........,}.,,,,|||...))}|((({{{.},}))},......,,....)