Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_FBXW7_0007700

Sequence Length

570 nt

GC Content

0.4544

AAUGUGAAAACCUUUGCAUCUUCUGAUAGUCUAGCCAAGGUCCAAGAAGUAGCAAGCUGGCUUUUGGAAAUGAAUCAGGAACUGCUCUCUGUGGGCAGCAAAAGACGACGAACUGGAGGCUCUCUGAGAGGUAACCCUUCCUCAAGCCAGGUAGAUGAAGAACAGAUGAAUCGUGUGGUAGAGGAGGAACAGCAACAGCAACUCAGACAACAAGAGGAGGAGCACACUGCAAGGAAUGGUGAAGUUGUUGGAGUAGAACCUAGACCUGGAGGCCAAAAUGAUUCCCAGCAAGGACAGUUGGAAGAAAACAAUAAUAGAUUUAUUUCGGUAGAUGAGGACUCCUCAGGAAACCAAGAAGAACAAGAGGAAGAUGAAGAACAUGCUGGUGAACAAGAUGAGGAGGAUGAGGAGGAGGAGGAGAUGGACCAGGAGAGUGACGAUUUUGAUCAGUCUGAUGAUAGUAGCAGAGAAGAUGAACAUACACAUACUAACAGUGUCACGAACUCCAGUAGUAUUGUGGACCUGCCCGUUCACCAACUCUCCUCCCCAUUCUAUACAAAAACAACAAAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-127.90 kcal/mol

Ensemble Metrics

Free Energy: -141.88

Frequency: 0.0000

Diversity: 141.77

Structure Visualization

Structure Prediction

MFE Structure Prediction

..(((...........((((((((.....((((((((.(.................))))))....((((((((((.....((((((.....)))))).......(..(.(((((..(((.((((...((((....(((((((..((((.(..(((.............))).).)))).)))))))....((..((((((((((..((......(.((.......)).)......)).)).))))))))..)).........)))))))))))........(((......)))))))).)..)............))))))))))(((...(((((...)))))....)))....)))......)))))))).....(((..((.....))..)))...((((((.((((((((.((.(((((..(((((((.(((((....)).))).)))............................(((((((((..(((.......)))....))))).))))..)))).)))))..))...)))))))).))))))........)))......

Thermodynamic Ensemble Prediction

..(((.....,,(({.((((((((..,.{(((,{({,,,,{,{,,,..,,.,....))))))}}},{(((((((((.....((((((.....))))))..........,...,|,..(((.((((,.,((((...,(((((((..((((.{..(((..,.......,..))).}.)))).)))))))....((..((((((((({..{,......(.((.......)).)......}}.)),,)))))))..))...,}}}..,}})))))))).....,.,||(({{{..,....)))})...............))))))))))(((...(((((...)))))....)))....))}.}.}..)))))))).,}..{{{.,({.....}}..))}...((((((.(((((((({(,.(,((({{(((((((.((({,....}}.}}}.}}|..,,....,..||,,...,,}.......{{{{{{{{{..{{{,,,,,..})}....})))}}})))..)))).},))))},)..})))))))).)))))).........,..,....