Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_FBXW7_0008800

Sequence Length

663 nt

GC Content

0.4766

UACCGCGCCGGAGCCUUCCGCAGCUGCCGCUUCAGUCCGAAGGAGGAAGGGAACCAACCCACUUUCUCGGCGCCGCGGCUCUUUUCUAAAAGUAAUGUGAAAACCUUUGCAUCUUCUGAUAGUCUAGCCAAGGUCCAAGAAGUAGCAAGCUGGCUUUUGGAAAUGAAUCAGGAACUGCUCUCUGUGGGCAGCAAAAGACGACGAACUGGAGGCUCUCUGAGAGGUAACCCUUCCUCAAGCCAGGUAGAUGAAGAACAGAUGAAUCGUGUGGUAGAGGAGGAACAGCAACAGCAACUCAGACAACAAGAGGAGGAGCACACUGCAAGGAAUGGUGAAGUUGUUGGAGUAGAACCUAGACCUGGAGGCCAAAAUGAUUCCCAGCAAGGACAGUUGGAAGAAAACAAUAAUAGAUUUAUUUCGGUAGAUGAGGACUCCUCAGGAAACCAAGAAGAACAAGAGGAAGAUGAAGAACAUGCUGGUGAACAAGAUGAGGAGGAUGAGGAGGAGGAGGAGAUGGACCAGGAGAGUGACGAUUUUGAUCAGUCUGAUGAUAGUAGCAGAGAAGAUGAACAUACACAUACUAACAGUGUCACGAACUCCAGUAGUAUUGUGGACCUGCCCGUUCACCAACUCUCCUCCCCAUUCUAUACAAAAACAACAAAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-164.30 kcal/mol

Ensemble Metrics

Free Energy: -178.25

Frequency: 0.0000

Diversity: 193.01

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((.(...(((((((((((..((((((((....(.((((.(((((..(((......))).))))))))))...)))))((.(((((((((((...((........((((..(((((.....(((.....)))....)))))..))))))..))))))))))).))........((((((.....))))))....)).)..))....)))))))))....).))))...(((((((..(((((((((((...........(((((((.((((..((((((....((..((((((((((..((......(.((.......)).)......)).)).))))))))..))....)))...)))....))))..)))))))(((((.......)))))................)))))))).)))...(((((...)))))((...))...........)))))))........(((..((.....))..)))...((((((.((((((((.((.(((((..(((((((.(((((....)).))).)))............................(((((((((..(((.......)))....))))).))))..)))).)))))..))...)))))))).)))))).................

Thermodynamic Ensemble Prediction

((((.{.,.((((((({({{,.{{,(((((..,.(.((({,(((((..(((......))).))))))))))|,.))))){{.{{{({{{{(({.,{((,,,....|||||}|{((((,,,.,,{,..|,.,}},|,.,}}}},.}},,}}}}))))))))}}}.}}.,}.....((((((.....))))))....,,.........,))))))))},.,.}.)))}...(((((((..((((.{,.(((...........{{|||{{.||||.,||||||....((..((((((((({..{,......(.((.......)).)......}}.)),,)))))))..))....)))...)))....)))}..}}}}}}}(((((.......))))).........,,.....}}}}})}},{||...(((((...)))))....}))...........}}}}}}}........|||.|||},...},..,}},,,((((((.(((((((({(,.(,((({{(((((((.((({,....}}.}}}.}}|..,,....,..||,,...,,}.......{{{{{{{{{..{{{,|,,,..})}....})))}}})))..)))).},))))},)..})))))))).)))))).................