Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_FBXW7_0010400

Sequence Length

428 nt

GC Content

0.3598

GUGAAUUUAGAAGGAGCCAUAGAUUUCGUUUUUGCUACCAGCCUAGGAAUUUACAUUUUAAUACAAGAACCCCUGCCUCCAGAGUGAUCUGUAAUUCUACUGAAGUUUGAGAACCACCACUGUAGAUUGUAGUUGAUGCUACGAGAAAGCAUAUAAUACCCUGAGGAAGCUGUGUGGAGUGGGAAAUGAGAAGUUGGAAACCUCAGAGCAACAACAUUGCUUUGAUAAGUAGGGGAAGUUAUAUGAUAGUUACGAUUAAUAUAUUAUAAGCAAUAUCUUUUAGUGCCUAGAAGUAAGAUUGGAAAUGUCUUGAAUUUUGUAUAAGAUCACAAAACUUACAGGAAGAAUAUCAAAAUUCCGAUUGAGGUUACUUUUUUCUGGGAGGGAUGGUGAAAUGUUAUUCUUUACCCUACAAUGUGUGAUUAAGA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-81.70 kcal/mol

Ensemble Metrics

Free Energy: -92.14

Frequency: 0.0000

Diversity: 149.58

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((((((..(((((...(((......))).))).))...))..))))))))......((((((((.(((((((.(((((.....(((....(((((((............((((((((.......(((....(((((.......)))))....)))........)).)).)))))))))))....)))..)))))....(((((((((.....)))))))))...)))))))..(((.(((((((((((....)))).)))))))))).....(((((((...)))))))((((((.......))))))..))))))))..(((((((..........(((((((((((..(((((..((.(((.........))).)).)))))..))).....))))))))...........)))))))....

Thermodynamic Ensemble Prediction

(((((((({{..(((((.,.{({,...,})},,))).))..,}},.}})))))).((((((((((....(((((((.,,((((.,..|||}...{(({{{,,.,,{{{.,...,,,({{((,{,..(((((((....))))))}....,||{,,,.,.{(,...}}.,,,}}}})),)))))....,.,,...}}}},...,(((((((({.....)))))))))...)))))))..(({.((((((({{({....}}}}.)))))))}}}.....{{{{{{{..,|||||||{((((({{{{,..||||||,,{{(({{,.......)}}}}}.}}.}}|||,,,,,.,|,...}))}}})).|,,}},}},.,,))))))||||.|{{|{{{......}}}}))}))}}......)))}}))))))