Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_FBXW7_0013800

Sequence Length

397 nt

GC Content

0.4257

UACCGCGCCGGAGCCUUCCGCAGCUGCCGCUUCAGUCCGAAGGAGGAAGGGAACCAACCCACUUUCUCGGCGCCGCGGCUCUUUUCUAAAAGUAAAAUAUAAGAAGCAUGGACAAUCUCAGUAGCAAUGGUUACAUGCAUCUUGGUUGCUAAAUAUGGCUCCCCAUUGAAAGAAUUCAAGAUGUCUUAGAAAAAUAGAUGAUCCCAGUUCUUAGGAAAACACACAGCAAGCCAGAAAACAAGGAAGUGGUGAAAAACUGAGGAAUUAUGUAAAAAAGAACCAACUCAAAGGAGUUCUAGUGGCCACCUCCGAAAUAAUGAUUGCAAUCACAGGCAUAUCUUGGAGAUGUUGUGGAUUCGGUUCCAGACCAUCACAAUAAAACAAAUAUUACAAUAAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-85.34 kcal/mol

Ensemble Metrics

Free Energy: -93.23

Frequency: 0.0000

Diversity: 108.22

Structure Visualization

Structure Prediction

MFE Structure Prediction

.........((((((.((((((((.(((((....(.((((.(((((..(((......))).))))))))))...)))))..((((((............((((((....(((..((((..(((((....)))))..(((((((((...((....((((....))))....))...)))))))))...........))))..)))...))))))))))))......((((..((........(((.(((((.(..(((((((......................))).....))))....).))))).))).......)).)))).(((.((((.....))))..)))))))))))...)))))).................................

Thermodynamic Ensemble Prediction

....,..,.((((((.((((((((.(((((....(.((({,(((((..(((......))).)))))))))),..))))).,((({{{.............,{{{.{(,{({{..,{{|,.{{,{{...,))}|),,|((((((((.,.((....((((....))))....}}...))))))))}.,,.......,|,||{{||{{{{((|{{,,.....{,{.{,.....{(.........))..,)))))...,}))),)),,}}}}.},....,,,.,.,{(({....))))),,.})))},,.((((((.{{,.{(.,((,.....}}.,))))).))))))..))))))))...)))))).}..,............................