Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_FGD4_0004900

Sequence Length

204 nt

GC Content

0.4314

UUCAACAACAUGUUGCUGUACUGUGUGCCCAAAUUCAGCUUGGUAGGCUCUAAAUUCACAGUUCGAACCAGGGUUGGCAUUGAUGGAAUGAAAAUUGUAGAGACUCAAAAUGAAGAAUAUCCACAUACUUUCCAGGUGUCUGGGAAAGAGAGAACACUGGAACUGCAGGCCAGUUCUGCGCAAGACAAAGAAGAAUGGAUCAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-33.10 kcal/mol

Ensemble Metrics

Free Energy: -38.83

Frequency: 0.0001

Diversity: 73.14

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((.........((((.....((((((......((((..((((....(((((..((((((((.(.(((....))).).)))).))))..........)))))..))))..)))).......))))))..((((((((.(((.......)))..)).))))))..(((((.....))))))))).........)))(.......)

Thermodynamic Ensemble Prediction

(((..,....{.{{{(,{{,.((((((......((((..((({..{,(((((.,{({,,{{{{(,{,({{..,,),).,))).},}},},....,,.))))).}})))..)))).......)))))},,((((((,,.,||,,,,,....},,,},}}||||,,(,,{,.}},}))))))))}.,....,..}}}|,,.....)