Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_FGD4_0009200

Sequence Length

476 nt

GC Content

0.3950

GUAUUUUAUUGCAAACUGUUGGAAGAAGCAAACCGAGGCUCGUUUCCAGCAGAGAUGGUGAAUAAAAUCUUUUCUAAUAUUUCAUCAAUAAAUGCCUUCCAUAGUAAAUUCCUCUUGCCAGAGCUGGAGAAACGAAUGCAAGAAUGGGAAACUACUCCUAGAAUUGGAGACAUCCUUCAGAAAUUGGCACCAUUCCUUAAGAUGUAUGGAGAAUAUGUGAAAGGAUUUGAUAAUGCAAUGGAAUUGGUUAAAAACAUGACAGAACGUAUUCCCCAGUUCAAAUCAGUGGUUGAAGAAAUUCAGUUCAACAACAUGUUGCUGUACUGUGUGCCCAAAUUCAGCUUGGUAGGCUCUAAAUUCACAGUUCGAACCAGGGUUGGCAUUGAUGGAAUGAAAAUUGUAGAGACUCAAAAUGAAGAAUAUCCACAUACUUUCCAGGUGUCUGGGAAAGAGAGAACACUGGAACUGCAGGCCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-102.90 kcal/mol

Ensemble Metrics

Free Energy: -112.55

Frequency: 0.0000

Diversity: 186.91

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((.........((((((((((.(((........)))..))))))))))...(((((((..................)))))))..))))))((.((.((((..(((((((.((((((..((((.....(((((....((((.(((..(((((.((.((((((((....)))..........(((((((...........((((((..(((((((.....(((((((....((...(((((..(((.............)))..)))))...)))))))))....((((((.........)))))).))))))).)))))))).)))))..)))))))...)))))..)))..))))...)))))..))))..))))))..)).)))))......(((.((...((........))...)).))).....(((((((.(((.......)))..)).)))))))))..))..))

Thermodynamic Ensemble Prediction

(((((({{{{{{...((((((((((.(((........)))..))))))))))...,{{{{||,,..,},,,{{{,..,{{|||||||,,,|||||(,,((...{{...,{{{{{,(((((,..(((({{....{..(.{{{...(((((......})))}...}}|,}..,...)))))}...,}}}}|,{{,{{{,...,{{{,,({{,{{|{{(({,.,.,{{((({{...,{|...{{{{{,,(({.......,,....,}},.})))}.}}}}))}}}}}.{{.((((((......,..}))))).}},}}}},}}},|||||}}|,},,,.}|}||,{{|||}},,|||..,}}},,})}}},.,}}},}},,)))))))}})))))}.....{{|,||,..{{....,,..},...}},))),..|{(((((.,,|))})}}},}}},},}}.||||},.,,..},,,))