Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_FGD4_0010100

Sequence Length

157 nt

GC Content

0.3694

GGAAACUACUCCUAGAAUUGGAGACAUCCUUCAGAAAUUGGCACCAUUCCUUAAGAUGUAUGGAGAAUAUGUGAAAGGAUUUGAUAAUGCAAUGGAAUUGGUUAAAAACAUGACAGAACGUAUUCCCCAGUUCAAAUCAGUGGUUGAAGAAAUUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-22.10 kcal/mol

Ensemble Metrics

Free Energy: -25.95

Frequency: 0.0019

Diversity: 55.86

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((.....((((.......))))...)))((..(((.((..(((((((......((....(((.((((((((.....(((((.((......)).))))).((((......))))...)))))))).)))..)).....))))).))..))..)))))

Thermodynamic Ensemble Prediction

(({.....(({{..,,,,,||}}...}})({,,{{,.((..{((((({......{{,,..({{.{{{{{{{|....|||{(({{{,,,.,.,,.||||},{|||....,.,..,...)))))))).))),,)).....))))))}}..,,..)))})