Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_FNDC3B_0000400

Sequence Length

359 nt

GC Content

0.5961

GCGGCGGCGGCGGCUGGAGGAGGAGAGCGGCGGCGGCGGGAGCAGCGAAGGGGGCGGCAGGGAUCCUCCAGGCUGCCGGCUGGGAAGGCGUGGGCGACCCGGUGUGUGGCGCGCCCAGAGCCCCGCGUUUCAGCCCUAGGGAAGGAAGCCAGUUGAGGGAAGUUCUCCAUGAAUGUACGUCACAAUGAUGAUGACCGACCAAAUCCCUCUGGAACUGCCACCAUUGCUGAACGGAGAGGUAGCCAUGAUGCCCCACUUGGUGAAUGGAGAUGCAGCUCAGCAGGUUAUUCUCGUUCAAGUUAAUCCAGGUGAGACUUUCACAAUAAGAGCAGAGGAUGGAACACUUCAGUGCAUUCAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-119.70 kcal/mol

Ensemble Metrics

Free Energy: -126.31

Frequency: 0.0000

Diversity: 121.41

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.((.((.((..((........)).)).)).)).)).((((((..(((((((((((.(((...))))).(((((((((((((((..(((.((((.....((((((...))))))....))))))).)))))))).(((.((.((..((.((((((((((.((((.....))))((.(((((......)))))))........))))))...))))))..)).)).)))........))))))).....)))))(((((.(((.((......))..))).)))))(((((((((((..(((.......((((.....)))))))..)))).))))))).....))))..))).)))...

Thermodynamic Ensemble Prediction

((.((.((.((.,((.....,,.,,.||.|}.}}.||,{{,{((..{{((,,((((({..({,..,))).,))))))(((((((((.(((.((((.....((((((...))))))....))))))).)))))))).,.{,,,.{{...|{{{{{((((({.{{{{.,...}}}}{{.(((((,.....)),)))}........}))))),,.,,)))||,||.||{||({{{,,{{{||{({{{.{{{.||,,{((((,.,,,.|,}}}.}},,}}))).,,)))}||}}})))))..,,,.......((((,...,)))).....,}))}),))}}},....))))..))).)))...