Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_FNDC3B_0003800

Sequence Length

219 nt

GC Content

0.4201

AUGGAGUUUGGCCUUGGUGGGAUUCUGUGUUGGGAGCUGCAGUCCCAGAUGCUUCUGCUAGUUUAAUAGAAGAGAUCAGGAAGAACAAACUGGCAAGUGAAUUGGACAGAUACAGACCCAAAAGACUUCAGAUAAUUGGAAAGAAAUUUUGCAACCAGGGCAUUUCUGCCAUCAAAACAGAGAGCACAAAACUUAUUGACAUGAGCCUGGAAUUUUGAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-43.00 kcal/mol

Ensemble Metrics

Free Energy: -48.35

Frequency: 0.0002

Diversity: 47.87

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(((((....(((((((((((..((((((((((((.......)))))(((.((((((.........))))))..)))............(((.(((.....)))..))))))))))))).................((.(((.....))).))))))))))....)).)))(((((((((.(..(((((......)))...))..))))...)))))).

Thermodynamic Ensemble Prediction

.(((((....(((((((((((..((((((((((((.......))))},...{{{{(((((((((...........,|.,.......,,}))))}},,},..}}},.),))))))))))),......,,,,......||,|{{,...,})).},))))))))....)).)))(((((((((.(.,({((,......,}}...)).,))))...)))))).