Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_FNDC3B_0009100

Sequence Length

352 nt

GC Content

0.4631

GAAGCCAGUUGAGGGAAGUUCUCCAUGAAUGUACGUCACAAUGAUGAUGACCGACCAAAUCCCUCUGGAACUGCCACCAUUGCUGAACGGAGAGGUAGCCAUGAUGCCCCACUUGGUGAAUGGAGAUGCAGCUCAGCAGGUUAUUCUCGUUCAAGUUAAUCCAGGUGAGACUUUCACAAUAAGAGCAGAGGAUGGAACACUUCAGUGCAUUCAAGGACCUGCUGAAGUUCCCAUGAUGUCACCCAAUGGAUCCAUUCCUCCCAUUCAUGUGCCUCCAGGUUAUAUCUCACAGUGGAGAAGAAUUAGAAUGUAACCUGAAAGAUCUUAGACCAGCAACAGAUUAUCAUGUGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-80.20 kcal/mol

Ensemble Metrics

Free Energy: -89.65

Frequency: 0.0000

Diversity: 127.27

Structure Visualization

Structure Prediction

MFE Structure Prediction

(..((.((((((((((.((((.....))))((.(((((......)))))))........))))))...))))))..)(..(((((......((((((..(((((..........(((((((((.((.((...((((((((((((((((((((..(((.......((((.....)))))))..)))).)))))).((((((....)))..)))...)))))))))).))))))))....)))))....(((.....)))......)))))))))))(((((((((((((......))))..........))))))))).............)))))(((........)))..)

Thermodynamic Ensemble Prediction

(..{{{,{{{{{((({.,||(|||,,|},}{{.{(((({..,,,})|}}},........}}},}},||,,}}}}..}{.{(((((....,,((((((..((((({{...,,.,{(({(((((({{{.,..{{({{{{{{{{{{{|(({{{{(,.{{{...,.,,{{{{{...|}}}},,,..)))).||||||{((.(((....|||,.||}...}}}})))))}})))}||||,...,}}}..,,})).}})},})},}.}},}))))))))))(((((((((((((......))}}.........,))))))))).....,,,.....)))))},|,}},,}}}))})})