Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_FNDC3B_0009300

Sequence Length

211 nt

GC Content

0.4787

CCAGUUGAGGGAAGUUCUCCAUGAAUGUACGUCACAAUGAUGAUGACCGACCAAAUCCCUCUGGAACUGCCACCAUUGCUGAACGGAGAGGUAGCCAUGAUGCCCCACUUGGUGAAUGGAGAUGCAGCUCAGCAGGUUAUUCUCGUUCAAGUUAAUCCAGGUGAGACUUUCACAAUAAGAGCAGAGGAUGGAACACUUCAGUGCAUUCAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-43.70 kcal/mol

Ensemble Metrics

Free Energy: -49.34

Frequency: 0.0001

Diversity: 60.63

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((.((((...))))))(((((((((((((((....)).))))...(((........))).....(((((.((((((((((.((((.(((((.(((.((..(((((........))).))..)))))...))))))))))))))............((((.....))))......))))).)).))).........)))))))))..

Thermodynamic Ensemble Prediction

.....{(,((({..,}})}|}(((((((((((((({....)).))))........,,((((((,,..,,{(((({((((((((({{((({{(((((.(((.((..(((((.,....,.))).))..)))))...)))))))))))))),,)}.}}}...)|||,,...|}},,.....,,,)))))),}||,....,}}.)))))))))..