Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_FNDC3B_0011800

Sequence Length

365 nt

GC Content

0.3918

GAAUUGCAUUCUUUUGGCAUUCCUGAGAGGAAAACAGCUGUAUUAACUUUUUUUUUUUUUUUUUUGGAAAGUGCAGAGGCAUCUCCCCUGACUCUCAGAAUUCCAGUUCUUUACAGCUGAGCAAAAACAGCAUGGCAUAUUAUUUAUGCCUGGAGUCAGCAUGCAUGAAUGUUGCUGUUCUGAUUAUUAGCCAAGAGAAAACAGCUGUAUACAUUACUAAUAAAAGGACUUUGAAAUGAAAAAAAAAAAAAUCCAAUAGUGGGGUUUUCCCCUAUAAACAGCAGAUGUGUACAGGGUUUUACCCCAUGUCUGCCCUGUACUUUAGCACCACUGUCCUGGGAGGUAAAUGGAAGCCAGCAUGAGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-88.80 kcal/mol

Ensemble Metrics

Free Energy: -96.56

Frequency: 0.0000

Diversity: 119.40

Structure Visualization

Structure Prediction

MFE Structure Prediction

........((((((((((.(((((...))))).((((((((................((((((((((..((((((((((((......((((((((.(((((....))))).....((((........))))..((((((.....)))))).))))))))(((......))).))))..))))..))))..))))))))))))))))))...(((((((......(((((..((.......................((..((((....))))..))....(((((((((....((((...)))))))))))))..(((......))).))..)))))....))).))))...)))))...)))))

Thermodynamic Ensemble Prediction

........((((((((((.(((({...}}}}}.((((((((...............,((((((((((..((({((({(({{,...,.(((({{{{,{((({....}}}}}.....((((........))))..((((((.....)))))).}))))|||{{.{,,...,})}))))}}}))}..,,,,..))))))))))))))))))...,,{{{{{......{((({,,({....,,........,,,......{{,.((((....)))),,)..{{{{{{{{|||({{{{((((...}}},,,})},,))}})))}},||,.|.,||..}}}}),,..)}))},,),,,)))))...)))))